| General information of RDP00187 | |
|---|---|
| Gene Symbol: | PDS5A |
| RefSeq ID: | NM_001100399 |
| Repeat coordinate: | chr4:39977559-39977580 (-) |
| Repeat size: | 7 |
| Repeat region: | 5' UTR |
| Repeat unit: | CGG |
| Repeat conservation: | PhastCons_score: 0.218; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | - |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to DisGeNET: | |||||
|---|---|---|---|---|---|
| Disease_name | RefSeq | Score | NofPmids | NofSnps | Source |
| Malignant neoplasm of prostate | NM_001100399 | 0.30 | 1 | 0 | CTD_human |
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
4
39977559
rs563638933
CCCGCCGCCGCCG
CCCGCCGCCG,CCCGCCGCCGCCGCCG,CCCGCCGCCGCCGCCGCCG,C,CCCGCCGCCGCCGCCGCCGCCG,CCCG
3504730.75
4
39977562
.
G
A
180371.65
4
39977564
.
C
T
9905.62
4
39977568
.
G
GCCA
9550.66
4
39977574
.
GCCGCCGCCCGC
G
520
4
39977577
rs534209628
GCCGC
GCCGCCCGC,GCCGCCGCCCGC,G,GCCGCCGCCGCCCGC,GCCCGC
32987.63
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
4
39977559
.
CCCG
CCCGCCG,C
.
4
39977564
.
C
CG
.
4
39977567
rs530249591
C
T
.
4
39977577
rs534209628
G
GC
.