| General information of RDP00180 | |
|---|---|
| Gene Symbol: | SATB1 |
| RefSeq ID: | NM_001322871 |
| Repeat coordinate: | chr3:18444724-18444742 (-) |
| Repeat size: | 6 |
| Repeat region: | 5' UTR |
| Repeat unit: | CGG |
| Repeat conservation: | PhastCons_score: 0.842; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | - |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to DisGeNET: | |||||
|---|---|---|---|---|---|
| Disease_name | RefSeq | Score | NofPmids | NofSnps | Source |
| Adenocarcinoma of lung (disorder) | NM_001322871 | 0.30 | 1 | 0 | CTD_human |
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
3
18444723
.
TGCC
TGCCGCC,TGCCGCCGCC,T,TGCCGCCGCCGCC
7154.88
3
18444729
.
C
G
140.47
3
18444734
.
C
T
2557.52
3
18444742
.
G
A
39.48
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
3
18444723
.
TGCC
T
.
3
18444741
rs569861882
C
A,G
.
3
18444741
.
C
CG
.