| General information of RDP00159 | |
|---|---|
| Gene Symbol: | KANSL1L |
| RefSeq ID: | NM_001307976 |
| Repeat coordinate: | chr2:210171296-210171341 (-) |
| Repeat size: | 15 |
| Repeat region: | 5' UTR |
| Repeat unit: | CGG |
| Repeat conservation: | PhastCons_score: 0.437; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | - |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
2
210171284
.
GCTCCCGCCCCGGCCGCCGCCGCCGCCGCCGCCGCC
ACTCCCGCCCCGGCCGCCGCCGCCGCCGCCGCCGCC,GGCCGCCGCC,G
13632.72
2
210171287
.
CCCGCCCCGGCCGCCGCCGCCGCCG
C,CCCG
43856.39
2
210171295
rs763791656
GGCCGCCGCCGCCGCCGCCGCCGCCGCC
GGCCGCCGCCGCC,GGCC,GGCCGCCGCC,GGCCGCCGCCGCCGCC,GGCCGCCGCCGCCGCCGCCGCCGCC,G
15897311.02
2
210171296
.
GC
G
14183812.61
2
210171299
.
GCCGCCGCC
GGCCGCC,GCGCCGCC,G
14194812.80
2
210171301
.
CG
C
14178441.94
2
210171302
.
GCCGCCGCCGCCGC
G,GGCCGC
14179749.12
2
210171305
.
GCCGCC
G
14165355.79
2
210171307
.
CG
C
14164749.49
2
210171309
.
CCGCCGCCGCCGCCG
C
14048897.25
2
210171317
.
GCC
G
1502294.12
2
210171320
.
GCCGCCGCCGCCGC
G
171277.99
2
210171323
.
GCC
G
24195.91
2
210171326
.
GCCGCCGCCGCCGC
G,ACCGCCGCCGCCGC
11139.64
2
210171332
.
G
A
1904.47
2
210171334
.
C
T
2018.22
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
2
210171295
rs776277492
GGCCGCCGCCGCC
G
.
2
210171295
rs66917529
GGCCGCCGCCGCCGCC
G,GGCC
.
2
210171295
.
GGCCGCCGCCGCCGCCGCC
G,GGCC
.
2
210171295
.
GGCCGCCGCCGCCGCCGCCGCC
G
.
2
210171295
rs763791656
GGCCGCCGCCGCCGCCGCCGCCGCC
G,GGCCGCCGCC
.
2
210171295
.
GGCCGCCGCCGCCGCCGCCGCCGCCGCC
G
.
2
210171295
.
GGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCC
G
.
2
210171302
.
G
C
.
2
210171308
.
G
C
.
2
210171310
.
C
G
.
2
210171317
.
G
C
.
2
210171319
.
C
G
.