| General information of RDP00156 | |
|---|---|
| Gene Symbol: | STK39 |
| RefSeq ID: | NM_013233 |
| Repeat coordinate: | chr2:168247544-168247562 (-) |
| Repeat size: | 6 |
| Repeat region: | 5' UTR |
| Repeat unit: | CGG |
| Repeat conservation: | PhastCons_score: 0.313; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | - |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to DisGeNET: | |||||
|---|---|---|---|---|---|
| Disease_name | RefSeq | Score | NofPmids | NofSnps | Source |
| Adenocarcinoma of lung (disorder) | NM_013233 | 0.30 | 1 | 0 | CTD_human |
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
2
168247546
.
C
T
66131
2
168247548
.
C
CCGCCGCCGCCGCCGCCGCCGT
7931.23
2
168247550
.
G
GCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCC
4072.87
2
168247551
.
C
CCGCCGCCGCCGCCGCCGCCGCCGT
3168.10
2
168247553
.
G
GCCGCCGCCGTCC
2913.04
2
168247560
.
C
CCGCCGCCGCCGCCGT
540.95
2
168247562
.
GTCC
G,GCC
741.19
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
2
168247543
.
GCCCGCCG
GCCCGCCGCCGCCG
.
2
168247544
.
CCCG
CCCGCCGCCGCCG,CCCGCCGCCGCCGCCG
.
2
168247544
.
CCCG
CCCGCCGCCGCCG,C
.
2
168247547
.
G
C
.