| General information of RDP00115 | |
|---|---|
| Gene Symbol: | SLCO3A1 |
| RefSeq ID: | NM_001145044 |
| Repeat coordinate: | chr15:91853877-91853901 (+) |
| Repeat size: | 8 |
| Repeat region: | 5' UTR |
| Repeat unit: | CGG |
| Repeat conservation: | PhastCons_score: 0.945; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | - |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to DisGeNET: | |||||
|---|---|---|---|---|---|
| Disease_name | RefSeq | Score | NofPmids | NofSnps | Source |
| Alcoholic Intoxication, Chronic | NM_001145044 | 0.31 | 1 | 0 | PSYGENET |
| Mapping repeat track to ESP: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
15
91853876
.
AGCG
AGCGGCG,A
.
15
91853898
.
GC
G
.
| Mapping repeat track to ExAC: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
15
91853876
rs571521309
AGCGGCGGCGGCG
AGCGGCGGCG,AGCGGCGGCGGCGGCG,A,AGCGGCG,AGCGGCGGCGGCGGCGGCG,AGCG
4866483.30
15
91853879
.
G
A
4365792.64
15
91853882
.
G
A
223790.77
15
91853893
rs750789932
C
T
622.36
15
91853895
.
G
T
277.32
15
91853896
.
C
A
12693.38
15
91853899
.
C
T
17226.58
15
91853900
.
G
T,C
555.70
15
91853901
.
G
T
459.65
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
15
91853870
.
AGCGGCAGCG
A
9407.75
15
91853876
rs571521309
AGCGGCGGCGGCG
AGCGGCGGCG,AGCGGCGGCGGCGGCG,AGCGGCGGCGGCGGCGGCG,AGCG,A
3604066.27
15
91853879
.
G
T
3260169.91
15
91853887
.
C
CGGG,CGGT
75825.25
15
91853896
.
C
A
1056.09
15
91853899
.
C
T
231.06
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
15
91853876
.
AGCG
A
.
15
91853876
rs368016879
AGCG
A,AGCGGCG
.
15
91853876
rs747769585
AGCGGCG
A,AGCG
.
15
91853876
rs780873531
AGCGGCGGCG
A
.
15
91853876
rs754472360
AGCGGCGGCGGCG
A,AGCG,AGCGGCG,AGCGGCGGCG,AGCGGCGGCGGCGGCG
.
15
91853890
.
C
G
.
15
91853893
rs750789932
C
G,T
.