| General information of RDP00114 | |
|---|---|
| Gene Symbol: | SLCO3A1 |
| RefSeq ID: | NM_001145044 |
| Repeat coordinate: | chr15:91853714-91853732 (+) |
| Repeat size: | 6 |
| Repeat region: | 5' UTR |
| Repeat unit: | CGG |
| Repeat conservation: | PhastCons_score: 0.138; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | - |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to DisGeNET: | |||||
|---|---|---|---|---|---|
| Disease_name | RefSeq | Score | NofPmids | NofSnps | Source |
| Alcoholic Intoxication, Chronic | NM_001145044 | 0.31 | 1 | 0 | PSYGENET |
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
15
91853712
.
TCGCGGCGGCGGC
T
530.70
15
91853713
rs778410409
CGCGGCGGCG
CGCGGCGGCGGCG,CGCGGCG,C,CGCGGCGGCGGCGGCG,CGCGGCGGCGGCGGCGGCGGCG,CGCGGCGGCGGCGGCGGCG
2424355.45
15
91853727
.
C
G
86.54
15
91853731
.
G
A
367.04
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
15
91853713
.
CGCG
C
.
15
91853713
rs58284139
CGCGGCGGCG
C,CGCGGCGGCGGCG
.
15
91853717
.
GCG
GCGGCG
.
15
91853727
.
C
G
.