| General information of RDP00111 | |
|---|---|
| Gene Symbol: | HDGFL3 |
| RefSeq ID: | NM_016073 |
| Repeat coordinate: | chr15:83207682-83207706 (-) |
| Repeat size: | 8 |
| Repeat region: | 5' UTR |
| Repeat unit: | CGG |
| Repeat conservation: | PhastCons_score: 0.185; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | - |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
15
83207682
rs564306913
CCCGCCGCCGCCG
CCCGCCGCCGCCGCCG,CCCGCCGCCG,CCCGCCGCCGCCGCCGCCGCCG,CCCGCCGCCGCCGCCGCCG,C,CCCG
2564442.43
15
83207698
.
C
CCGG
714.41
15
83207702
.
C
A
2875.60
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
15
83207682
.
CCCG
CCCGCCG,C
.
15
83207682
.
CCCGCCG
C
.
15
83207682
.
CCCGCCGCCG
C
.
15
83207682
.
CCCGCCGCCGCCG
C
.
15
83207703
.
GCCGCGCGC
GCCGCGCAC
.