| General information of RDP00109 | |
|---|---|
| Gene Symbol: | TLE3 |
| RefSeq ID: | NM_001105192 |
| Repeat coordinate: | chr15:70097454-70097472 (-) |
| Repeat size: | 6 |
| Repeat region: | 5' UTR |
| Repeat unit: | CGG |
| Repeat conservation: | PhastCons_score: 0.265; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | - |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to DisGeNET: | |||||
|---|---|---|---|---|---|
| Disease_name | RefSeq | Score | NofPmids | NofSnps | Source |
| Mammary Carcinoma, Human | NM_001105192 | 0.30 | 1 | 0 | CTD_human |
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
15
70097447
.
TGCCGCTGCCGCCGCC
T
4350.03
15
70097453
.
TGCCGCCGCC
TGCCGCCGCCGCC,T,TGCCGCCGCCGCCGCC,TGCC
41536.89
15
70097459
rs536847024
C
T,A
9025.44
15
70097462
.
C
CGCCGCCGCCGCT
7047.73
15
70097463
.
G
C
436.75
15
70097465
.
C
T
444.74
15
70097468
.
C
CGCCGCT
1175.63
15
70097471
rs556822138
C
CGCT,T,G
60400.28
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
15
70097453
.
TGCCGCC
T
.
15
70097459
rs536847024
C
T
.
15
70097468
.
C
CGCCGCT
.
15
70097471
rs556822138
C
CGCT
.