| General information of RDP00094 | |
|---|---|
| Gene Symbol: | RAP2A |
| RefSeq ID: | NM_021033 |
| Repeat coordinate: | chr13:97434439-97434457 (+) |
| Repeat size: | 6 |
| Repeat region: | 5' UTR |
| Repeat unit: | CGG |
| Repeat conservation: | PhastCons_score: 0.562; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | - |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to DisGeNET: | |||||
|---|---|---|---|---|---|
| Disease_name | RefSeq | Score | NofPmids | NofSnps | Source |
| Rheumatoid Arthritis | NM_021033 | 0.30 | 1 | 0 | CTD_human |
| Mapping repeat track to ESP: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
13
97434437
.
GGGC
GGGCGGC,G
.
| Mapping repeat track to ExAC: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
13
97434437
rs768018180
GGGCGGCGGC
GGGCGGC,GGGCGGCGGCGGC,GGGC,GGGCGGCGGCGGCGGC,G,GGGCGGCGGCGGCGGCGGC
479214.97
13
97434440
.
C
CGGA
349904.44
13
97434441
rs751113354
G
T
25770.91
13
97434444
.
G
A
10936.69
13
97434446
rs756869866
C
T
12676.27
13
97434449
.
C
T
1129.38
13
97434453
rs757609120
G
A,GGCGGCC
4241.81
13
97434454
rs780689796
G
A
4507.43
13
97434456
rs749767702
G
C
17493.84
13
97434457
rs769076387
G
A
2995.86
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
13
97434437
rs768018180
GGGCGGCGGC
GGGCGGCGGCGGC,GGGCGGC,GGGC,GGGCGGCGGCGGCGGC,G
13012.43
13
97434453
rs757609120
G
A
275.51
13
97434456
rs749767702
G
C
779.16
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
13
97434437
.
GGGC
G
.
13
97434437
rs755279212
GGGC
G
.
13
97434437
rs777948588
GGGCGGC
G
.
13
97434437
rs756171551
GGGCGGCGGC
G,GGGC,GGGCGGC,GGGCGGCGGCGGC,GGGCGGCGGCGGCGGC,GGGCGGCGGCGGCGGCGGC
.
13
97434441
rs751113354
G
T
.
13
97434446
rs756869866
C
T
.
13
97434452
.
C
G
.
13
97434453
rs757609120
G
GGCGGCC
.
13
97434454
rs780689796
G
A
.
13
97434456
rs749767702
G
C
.
13
97434457
rs769076387
G
A
.