| General information of RDP00077 | |
|---|---|
| Gene Symbol: | KDM2A |
| RefSeq ID: | NM_012308 |
| Repeat coordinate: | chr11:67119347-67119365 (+) |
| Repeat size: | 6 |
| Repeat region: | 5' UTR |
| Repeat unit: | CGG |
| Repeat conservation: | PhastCons_score: 0.957; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | - |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to DisGeNET: | |||||
|---|---|---|---|---|---|
| Disease_name | RefSeq | Score | NofPmids | NofSnps | Source |
| PROSTATE CANCER, HEREDITARY, 1 | NM_012308 | 0.30 | 1 | 0 | CTD_human |
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
11
67119346
.
AGCG
A,AGCGGCG,AGCGGCGGCGGCG,GGCG,AGCGGCGGCG
15405.70
11
67119351
.
C
T
1378.23
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
11
67119350
.
G
C
.
11
67119350
.
G
GC
.
11
67119363
.
C
T
.