| General information of RDP00068 | |
|---|---|
| Gene Symbol: | GRK5 |
| RefSeq ID: | NM_005308 |
| Repeat coordinate: | chr10:119207706-119207733 (+) |
| Repeat size: | 9 |
| Repeat region: | 5' UTR |
| Repeat unit: | CGG |
| Repeat conservation: | PhastCons_score: 0.886; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | - |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to DisGeNET: | |||||
|---|---|---|---|---|---|
| Disease_name | RefSeq | Score | NofPmids | NofSnps | Source |
| Liver Dysfunction | NM_005308 | 0.30 | 1 | 0 | CTD_human |
| Mapping repeat track to 1000 Genomes: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
10
119207705
.
AGCGGCG
A
100
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
10
119207705
rs748884473
AGCGGCGGCGGCGGCGGCG
AGCGGCGGCGGCG,AGCGGCGGCG,AGCGGCGGCGGCGGCG,AGCG,A,AGCGGCGGCGGCGGCGGCGGCG
13011761.57
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
10
119207705
.
AGCG
A
.
10
119207705
.
AGCGGCG
A
.
10
119207705
rs748884473
AGCG
A
.
10
119207705
rs76422636
AGCGGCG
A,AGCG
.
10
119207705
.
AGCGGCGGCG
A,AGCG
.
10
119207706
.
GCGGCGG
G
.
10
119207706
.
GCGGCGGC
GC
.
10
119207706
.
GCGGCGGCGG
GCGG
.
10
119207706
.
GCGGCGGCGGC
GCGGC
.
10
119207706
.
GCGGCGGCGGCG
GCGGCG
.
10
119207706
.
GCGGCGGCGGCGG
GCGGCGG
.
10
119207706
.
GCGGCGGCGGCGGCGG
GCGGCGGCGG
.
10
119207706
.
GCGGCGGCGGCGGCGGCGGCGGCGG
GCGGCGGCGGCGGCGGCGG
.
10
119207706
.
GCGGCGGCGGCGGCGGCGGCGGCGGCG
GCGGCGGCGGCGGCGGCGGCG
.
10
119207708
rs28399015
G
A
.
10
119207712
.
G
GA,GGA
.
10
119207713
.
C
A
.
10
119207713
.
CGG
GA
.
10
119207717
.
G
A
.
10
119207722
.
C
A,G
.