| General information of RDP00064 | |
|---|---|
| Gene Symbol: | FRA10AC1 |
| RefSeq ID: | NM_001347712 |
| Repeat coordinate: | chr10:93702522-93702546 (-) |
| Repeat size: | 8 |
| Repeat region: | 5' UTR |
| Repeat unit: | CGG |
| Repeat conservation: | PhastCons_score: 0.001; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | - |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to 1000 Genomes: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
10
93702522
.
ACCG
A
100
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
10
93702479
.
ACAGGTCCCGTGCGCCCTGCCGCACAGCCTCGCCACAACCACCACCGCCGCCGCCG
GCAGGTCCCGTGCGCCCTGCCGCACAGCCTCGCCACAACCACCACCGCCGCCGCCG,A
5502.37
10
93702500
.
GCACAGCCTCGCCACAACCACCACCGC
G
2478.67
10
93702525
rs12241678
G
A
8915441.99
10
93702526
.
C
CCGCCGCCGCCG
2155831.80
10
93702528
rs112008187
G
A
2043596.45
10
93702529
.
C
CCGCCGCCG
18840.93
10
93702530
.
C
A
15426.25
10
93702531
rs11187598
G
A
1732661.85
10
93702532
.
C
CCGCCG
7113.43
10
93702533
.
C
T
5118.76
10
93702534
.
G
A
8987.24
10
93702537
rs867741999
GCCGCCGCCGC
ACCGCCGCCGC,G
4787.69
10
93702543
.
G
A,GCCGCCGCCGCCA
4961.99
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
10
93702522
.
ACCG
A
.
10
93702522
rs139811637
ACCG
ACCA,ACCACCGCCGCCG,ACCACCGCCGCCGCCGCCG,ACCACCGCCGCCGCCGCCGCGCCGCCG,ACCGCCG,A
.
10
93702522
rs142842799
ACCGCCG
ACCG,A
.
10
93702523
.
CCGCCGCCG
CCA,CCGCCG
.
10
93702524
.
CGCCGCCG
CA
.
10
93702525
rs12241678
G
A
.
10
93702525
.
GCCG
A
.
10
93702525
rs386746644
GCCGCCG
A,ACCGCCG,GCCG
.
10
93702525
.
GCCGCCGCCG
A,ACCG,ACCGCCG,GCCG,GCCGCCG
.
10
93702528
rs112008187
G
A
.
10
93702528
.
G
GC
.
10
93702531
rs11187598
G
A
.
10
93702538
.
C
CCG
.
10
93702543
.
G
C
.
10
93702543
.
GCC
G
.
10
93702546
.
G
T
.