| General information of RDP00061 | |
|---|---|
| Gene Symbol: | RALGPS2 |
| RefSeq ID: | NM_001286247 |
| Repeat coordinate: | chr1:178725265-178725283 (+) |
| Repeat size: | 6 |
| Repeat region: | 5' UTR |
| Repeat unit: | CGG |
| Repeat conservation: | PhastCons_score: 0.800; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | - |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
1
178725264
rs761548068
AGCGGCG
AGCGGCGGCG,AGCGGCAGCGGCGGCG,AGCGGCGGCGGCGGCG,AGCGGCGGCGGCG,A
214201.76
1
178725266
.
C
CT
34960.30
1
178725267
rs10634530
G
GGCA,GGCAGCGGCA,GCA,GGCC
19047529.32
1
178725268
.
G
GCAA
1154.80
1
178725269
.
C
CA
371.08
1
178725270
rs112986195
G
A,GCA
31670.20
1
178725276
.
G
A
832.23
1
178725279
.
G
GGCGGCT
288.42
1
178725282
.
G
GGCT
26410.55
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
1
178725262
.
GCAGCGGC
GCAGCGGCAGC
.
1
178725263
.
CAGCGGCGG
CAGCGGCAGCGG
.
1
178725263
.
CAGCGGCGGCGGCGGCGGCGGCTGCT
CAGCGGCAGCGGCGGCGGCGGCGGCTGCT
.
1
178725264
.
AGCG
AGCGGCA
.
1
178725264
.
AGCGGCG
AGCGGCAGCG
.
1
178725264
.
AGCGGCGGC
AGCGGCAGCGGC
.
1
178725264
.
AGCGGCGGCGGC
AGCGGCAGCGGCGGC
.
1
178725265
.
GCG
GCGGCA
.
1
178725265
.
GCGG
GCGGCAG
.
1
178725265
.
GCGGC
GCGGCAGC
.
1
178725265
.
GCGGCG
GCGGCAGCG
.
1
178725265
.
GCGGCGG
GCGGCAGCGG
.
1
178725265
.
GCGGCGGCG
GCGGCAGCGGCG
.
1
178725266
.
CG
CGGCA
.
1
178725266
.
CGGCG
CGGCAGCG
.
1
178725266
.
CGGCGGCG
CGGCAGCGGCG
.
1
178725267
.
G
A,GGCA
.
1
178725267
.
GGCG
GGCAGCG
.
1
178725267
.
GGCGGCG
GGCAGCGGCG
.
1
178725267
.
GGCGGCGGC
GGCAGCGGCGGC
.
1
178725267
rs56112467
G
GGCA
.
1
178725268
.
GC
GCAGC
.
1
178725268
.
GCG
GCAGCG
.
1
178725268
.
GCGGCG
GCAGCGGCG
.
1
178725270
rs112986195
G
A
.
1
178725270
.
GGCG
AGCG
.