| General information of RDP00050 | |
|---|---|
| Gene Symbol: | UBE2Q1 |
| RefSeq ID: | NM_017582 |
| Repeat coordinate: | chr1:154558614-154558647 (-) |
| Repeat size: | 11 |
| Repeat region: | 5' UTR |
| Repeat unit: | CGG |
| Repeat conservation: | PhastCons_score: 0.461; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | - |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to 1000 Genomes: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
1
154558614
.
TCCG
T
100
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
1
154558614
rs368389808
TCCGCCGCCGCCG
TCCGCCGCCG,TCCG,TCCGCCG,T,TCCGCCGCCGCCGCCG,TCCGCCGCCGCCGCCGCCG
9016459.66
1
154558617
.
G
GCCT,C
8786107.48
1
154558623
.
G
A
325536.33
1
154558626
.
G
T
277964.51
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
1
154558614
rs781690472
TCCG
TCCGCCG,T
.
1
154558614
rs747345710
TCCGCCG
T
.
1
154558614
.
TCCGCCGCCGCCG
TCCGCCGCCG,T
.
1
154558624
rs5777917
C
A
.