General information of RDP00039
Gene Symbol:CDK11B
RefSeq ID:NM_001291345
Repeat coordinate:chr1:1658932-1658950 (-)
Repeat size:6
Repeat region:5' UTR
Repeat unit:CGG
Repeat conservation:PhastCons_score: 0.834; Repeat Conservation from UCSC Genome Browser
Amino acid sequence:-
Gene expression and GO annotation: BioGPS
Protein expression:Human Protein Altas
Gene conservation:Gene Conservation from UCSC Genome Browser
Mapping repeat track to 1000 Genomes:
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
1
1658918
.
ACGCCGCCGCCGCTGCCGCCGC
A
100
Mapping repeat track to gnomAD:
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
1
1658918
rs561872754
ACGCCGCCGCCGCTGCCGCCGC
A,ACGC,ACGCCGCCGCCGCTGCCGCCGCCGCCGCTGCCGCCGC,ACGCCGCCGCCGCTGCCGCCGCCGCCGCCGCCGCTGCCGCCGC
6065.62
1
1658931
rs532220148
TGCC
T,TGCCGCC,CGCC,TGCCGCCGCCGCC,TGCCGCCGCC
23467.17
1
1658947
.
G
A
679.40
1
1658950
.
G
T
2525.95
Mapping repeat track to Kaviar:
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
1
1658918
rs561872754
ACGCCGCCGCCGCTGCCGCCGC
A
.
1
1658931
.
TGCC
T
.
1
1658937
rs111739197
C
T
.
1
1658949
rs539785272
C
T
.
1
1658950
.
G
C
.