| General information of RDP00039 | |
|---|---|
| Gene Symbol: | CDK11B |
| RefSeq ID: | NM_001291345 |
| Repeat coordinate: | chr1:1658932-1658950 (-) |
| Repeat size: | 6 |
| Repeat region: | 5' UTR |
| Repeat unit: | CGG |
| Repeat conservation: | PhastCons_score: 0.834; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | - |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to 1000 Genomes: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
1
1658918
.
ACGCCGCCGCCGCTGCCGCCGC
A
100
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
1
1658918
rs561872754
ACGCCGCCGCCGCTGCCGCCGC
A,ACGC,ACGCCGCCGCCGCTGCCGCCGCCGCCGCTGCCGCCGC,ACGCCGCCGCCGCTGCCGCCGCCGCCGCCGCCGCTGCCGCCGC
6065.62
1
1658931
rs532220148
TGCC
T,TGCCGCC,CGCC,TGCCGCCGCCGCC,TGCCGCCGCC
23467.17
1
1658947
.
G
A
679.40
1
1658950
.
G
T
2525.95
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
1
1658918
rs561872754
ACGCCGCCGCCGCTGCCGCCGC
A
.
1
1658931
.
TGCC
T
.
1
1658937
rs111739197
C
T
.
1
1658949
rs539785272
C
T
.
1
1658950
.
G
C
.