| General information of RDP00032 | |
|---|---|
| Gene Symbol: | GNB2 |
| RefSeq ID: | NM_005273 |
| Repeat coordinate: | chr7:100673817-100673850 (+) |
| Repeat size: | 11 |
| Repeat region: | 5' UTR |
| Repeat unit: | CCG |
| Repeat conservation: | PhastCons_score: 0.668; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | - |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
7
100673812
.
TCCGCGCCG
T
9414.51
7
100673815
rs764425523
GCGCCGCCGCCGC
GCGCCGCCGC,GCGCCGC,GCGCCGCCGCCGCCGCCGCCGCCGC,GCGC,G,GCGCCGCCGCCGCCGC
11464484.25
7
100673818
.
C
CCGCCGCCGG,CCGG
9927446.82
7
100673820
.
G
A
3668873.91
7
100673821
.
C
A,T
3668248
7
100673824
rs865831724
C
A,CAA
514598.90
7
100673826
.
G
GCCGCCGCCGCCGCCGCCGCCGCCGCCT,GCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCT,GCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCCCCGCCT
117097.60
7
100673829
.
GCCGCCGCCGCCGCCGCCGCCGCCT
G
58078.63
7
100673832
.
G
GCCGCCGCCGCCGCCGCCT
34122.55
7
100673835
.
GCC
GCCGCCGCCGCCGCCTCC,G
26110.22
7
100673837
.
CG
C
20392.71
7
100673838
.
GC
G
21095.03
7
100673839
.
CCG
C
20958.56
7
100673840
.
C
T
9440.21
7
100673841
.
GCCGCCGCCGCCT
G,TCCGCCGCCGCCT,CCCGCCGCCGCCT,GCCGCCGCCTCCGCCGCCGCCT,GGCCGCCGCCT
10989.71
7
100673843
.
C
T
3559.40
7
100673844
rs11558713
G
GCCGCCT
3438.88
7
100673847
rs184618870
G
GCCT,GCCGCCT,T,GCCGCCGCCT
144361.92
7
100673850
rs376692035
GCCT
G,GCCTCCT
2361.51
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
7
100673815
rs768105101
GCGC
GCGCCGC,GCGCCGCCGCCGCCGC,G
.
7
100673815
rs764425523
GCGCCGC
GCGC,G
.
7
100673815
.
GCGCCGCCGC
GCGCCGC,G
.
7
100673815
.
GCGCCGCCGCCGC
GCGCCGCCGC,G
.
7
100673818
.
C
A
.
7
100673824
.
C
A
.
7
100673844
rs11558713
G
T
.
7
100673847
rs184618870
G
T
.
7
100673847
.
G
GCCT
.
7
100673850
rs376692035
G
C,T
.