| General information of RDP00026 | |
|---|---|
| Gene Symbol: | NDRG3 |
| RefSeq ID: | NM_022477 |
| Repeat coordinate: | chr20:36746080-36746119 (-) |
| Repeat size: | 13 |
| Repeat region: | 5' UTR |
| Repeat unit: | CCG |
| Repeat conservation: | PhastCons_score: 0.081; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | - |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
20
36746076
rs568287557
AGCAGCGGCGGCGGCGGCGGCGGCGGCG
A,TGCAGCGGCGGCGGCGGCGGCGGCGGCG,AGCGGCGGCGGCGGCGGCGGCG,AGCAGCGGCAGCGGCGGCGGCGGCGGCGGCGGCG,AGCGGCGGCGGCGGCGGCG
74496.80
20
36746079
rs11466997
AGCGGCGGCGGCGGCGGCG
AGCGGCGGCGGCG,AGCGGCGGCGGCGGCG,AGCG,AGCGGCGGCG,A,AGCGGCGGCGGCGGCGGCGGCG
11351931.71
20
36746080
.
GCGGC
G
10198186.78
20
36746081
.
C
CA
10196266.12
20
36746082
.
G
A,GGCAGCA,GCGGCGGCGGCA,GCA,GGCGGCGGCA
10076189.29
20
36746083
.
G
T
9626754.59
20
36746084
.
C
CA
9616966.12
20
36746085
.
G
A,GGCGGCA,GCA,GGCAGCA,GGCGGCGGCGGCGGCA
9586098.85
20
36746088
.
G
A
1098386.84
20
36746092
.
G
T
968204.66
20
36746094
rs550584207
G
A
968318.54
20
36746098
.
G
A
24678.84
20
36746100
.
G
A
24402.64
20
36746103
.
G
T
21679.57
20
36746109
.
G
A
1105.85
20
36746113
.
G
A
485.88
20
36746118
.
G
A
331.36
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
20
36746078
.
CAGCGGCGGCGGCGGCGGCGG
CAG
.
20
36746079
.
AGCG
A
.
20
36746079
rs11466997
AGCGGCG
A,AGCG,AGCGGCGGCG
.
20
36746079
.
AGCGGCGGCGGCG
A
.
20
36746079
.
AGCGGCGGCGGCGGCG
A
.
20
36746082
.
G
A
.
20
36746082
.
G
GGCAGCA
.
20
36746085
.
G
A
.
20
36746091
rs535705269
G
A
.
20
36746094
rs550584207
G
A
.
20
36746097
rs568739361
G
A
.
20
36746108
.
C
A
.