| General information of RDP00023 | |
|---|---|
| Gene Symbol: | DAZAP1 |
| RefSeq ID: | NM_001352033 |
| Repeat coordinate: | chr19:1407620-1407662 (+) |
| Repeat size: | 14 |
| Repeat region: | 5' UTR |
| Repeat unit: | CCG |
| Repeat conservation: | PhastCons_score: 0.818; Repeat Conservation from UCSC Genome Browser |
| Amino acid sequence: | - |
| Gene expression and GO annotation: | BioGPS |
| Protein expression: | Human Protein Altas |
| Gene conservation: | Gene Conservation from UCSC Genome Browser |
| Mapping repeat track to DisGeNET: | |||||
|---|---|---|---|---|---|
| Disease_name | RefSeq | Score | NofPmids | NofSnps | Source |
| Schizophrenia | NM_001352033 | 0.30 | 1 | 0 | PSYGENET |
| Mapping repeat track to gnomAD: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
19
1407619
.
AGCC
A,AGCCGCCGCCGCC,AGCCGCC,AGCCGCCGCCGCCGCC,AGCCGCCGCC,AGCCGCCGCCGCCGCCGCC
5296258.76
19
1407620
.
GCC
G
805352.64
19
1407625
.
C
A
151571.79
19
1407627
.
C
T
94641.29
19
1407630
.
C
CCG,CCGCCGCCGCCGT
71363.36
19
1407633
.
C
T
6841.83
19
1407644
.
GCC
G
831.19
19
1407645
.
C
T
821.01
19
1407646
.
CGCCGCCGCCGCCGCCGTT
C
2137.18
19
1407647
.
GC
G
1979.33
19
1407648
.
C
CCGCCGCCGCCGT
2184.02
19
1407653
rs868077589
G
A
1732.85
19
1407656
.
GCCGCC
G
1694.23
19
1407660
.
C
CCGT
2972.86
19
1407661
.
CGTTGCGCAGATCCGG
CTTGTTGCGCAGATCCGG,C,CGCGGTTGCGCAGATCCGG
3284.83
19
1407662
.
GTTGCGCAGAT
GGCGCAGAT,G
3820.28
| Mapping repeat track to Kaviar: |
|---|
Chr
Pos
dbSNP_ID
Ref
Alt
Qual
19
1407619
.
AGCC
A,AGCCGCC,AGCCGCCGCC
.
19
1407619
.
AGCCGCC
A
.
19
1407619
.
AGCCGCCGCC
A
.
19
1407620
.
GCCGCCGCCGCCGCCGCCGCCGCCGCCGCCG
GCCG
.
19
1407639
.
CCGCC
CCGCCG
.
19
1407641
rs113047815
G
C
.
19
1407641
.
GCC
GCCG
.
19
1407659
.
G
C
.